Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953607.1_cds_XP_016492700.1_82886
CDS Infomation

[gene=LOC107812179] [db_xref=GeneID:107812179] [protein=4-coumarate--CoA ligase-like 5] [protein_id=XP_016492700.1] [location=complement(join(106164..106277,106408..106510,106634..106701,106842..106987,108649..109888))] [gbkey=CDS]
Sequence

ATGGCACAGTTTAGCAATGGCTCAACCGTCGATCCAAGAACCGGCTATTCTCCGGCGGAC
TCAACATTCTACAGTAAACGAGACCCAATTCCCTTGCCAGCAAATGAAGCTCTCGACGTG
ACAACTTTCATATCATCACGAGCACACCGCGGCAAAGTCGCTTTCATCGACGCCACAACA
GGGCAGCAACTCACTTTCTCCGACGTCTGGAACGCCGTCGAATCTTTAGCCACGTGTCTC
TCTATCGACATGGGAATTCGTAAGGGCAACGTAGTTCTTCTCCTCTCACCAAACTCCATC
TATTTCCCCATTGTTTGCCTCGCCGTCATGTCCCTCGGCGCTATTATCACCACAACAAAC
CCCCTCAACACCCCACGTGAAATTAACAAACAGATCAAAGATTCAAACCCTGTAATCGCT
TTCACAATCCCTGAACTCCTCCCTAAGCTCGTCGATTCTAATCTCCCGATTATTCTTATC
AACAATCAAACAACAAATCTTACTCAAAAGGATAATTTTAATTTCAAGATTTTGGGTAAT
TTAGAGAATTTGATTCAGAAAAAACCTGTTCAAAGCAGATTGAAAGAGCGAGTGACACAA
GATGATACGGCTACTCTGCTTTATTCTTCAGGAACTACTGGTGCAAGTAAAGGAGTTGTT
TCATCTCATAGAAATTTAATTGCTATGGTTCAAACAATTGTGGGTCGGTTCAAATTAGAC
CAGGGAGAACAAACTTTTATATGTACGGTACCCATGTTTCATATTTACGGTTTAGCAGCT
TTTGCAGCAGGATTATTAGCTAGTGGATCGACAGTCGTGGTACTATCGAAATTTGAAATG
GACGAAATGTTATTATCAATTCACAAATACAAAGCAACTTATTTACCACTCGTGCCACCA
ATTCTTGTTGCTTTAGTGAATAATGCTGAGGTGATTAAAAAGAAATATGATTTGAGCAGT
TTAAAGAAAGTTCTTTCTGGGGGTGCACCGTTAAGTAAGGAAGTAATTGAAGGGTTTTTG
GAGAAATATCCTAGTGTGGCAATTTTGCAAGGGTATGGGTTGACTGAATCAACGGCAATT
GGGGCGTCAACGGATTCGTTAGAGGAGAGCCGGAGATATGGGACGGCGGGGATGTTGTCG
CCGAGCATGTCGGCAAAAATTGTGGATCCGGAAAGTGGGAAGGCTTTTCCGGTGAATAAG
ACCGGTGAACTTTGGCTAAGGGGACCTACCATTATGAAAGGTTATTTCAGTAATGAAGAA
GCTACTGCCTCAACTTTAGACTCAGAGGGATGGTTAAGAACTGGAGATCTCTGTTATATA
GATGAGGACGGTTTCATTTTTGTGGTTGATAGATTAAAGGAGCTGATCAAATATAAGGGT
TATCAGGTTCCTCCAGCAGAGTTAGAGGCTTTGTTGCTCACTCATCCAGAAATTTCTGAT
GCTGCTGTTATACCGTTTCCGGATAAGGATGTCGGACAGTTTCCTATGGCATATGTAGTA
AGAAAATCTGGAAGTAGTCTGTCAGAGAGTGCAGTCATGGATTTTATTGCCAAACAGGTG
GCTCCATACAAGAGAATCCGGAGAGTTGCATTTGTGGCTTCCATACCCAAGAATCCTTCT
GGCAAAATACTCAGGAAGGATCTGATAAAGCTAGCAACATCTAAACTTTGA

Peptide Sequence

PEP ID

XP_016492700.1
PEP Infomation

PREDICTED: 4-coumarate--CoA ligase-like 5 [Nicotiana tabacum]
Sequence

MAQFSNGSTVDPRTGYSPADSTFYSKRDPIPLPANEALDVTTFISSRAHRGKVAFIDATT
GQQLTFSDVWNAVESLATCLSIDMGIRKGNVVLLLSPNSIYFPIVCLAVMSLGAIITTTN
PLNTPREINKQIKDSNPVIAFTIPELLPKLVDSNLPIILINNQTTNLTQKDNFNFKILGN
LENLIQKKPVQSRLKERVTQDDTATLLYSSGTTGASKGVVSSHRNLIAMVQTIVGRFKLD
QGEQTFICTVPMFHIYGLAAFAAGLLASGSTVVVLSKFEMDEMLLSIHKYKATYLPLVPP
ILVALVNNAEVIKKKYDLSSLKKVLSGGAPLSKEVIEGFLEKYPSVAILQGYGLTESTAI
GASTDSLEESRRYGTAGMLSPSMSAKIVDPESGKAFPVNKTGELWLRGPTIMKGYFSNEE
ATASTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVPPAELEALLLTHPEISD
AAVIPFPDKDVGQFPMAYVVRKSGSSLSESAVMDFIAKQVAPYKRIRRVAFVASIPKNPS
GKILRKDLIKLATSKL

Transcript Sequence

Gene sequence data has not been registered.